- 2D Image Post-Processing Techniques and Algorithms (DIY Drones) — understanding how automated image matching and processing tools work means you can also get a better understanding how to shoot your images and what to prevent to get good matches.
- Scientists Need to Learn to Share — despite science’s reputation for rigor, sloppiness is a substantial problem in some fields. You’re much more likely to check your work and follow best data-handling practices when you know someone is going to run your code and parse your data.
- METRICS — Meta-Research Innovation Center at Stanford. John Ioannidis has a posse: connecting researchers into weak science, running conferences, creating a “journal watch”, and engaging policy makers. (says The Economist)
- Grafana — elegant dashboard for graphite (the realtime data graphing engine).
Definitive answers require further testing
The following is from the second issue of BioCoder, the quarterly newsletter for synthetic biologists, DIY biologists, neurobiologists, and more. Download your free copy today.
Within DIYbio, one cannot escape the hacking metaphor. The metaphor is ubiquitous and, to a point, useful. The term connotes both productive play with an existing technology aimed at improvement and, at the same time, play with sinister undertones. In this sense, hacking captures the promise and pitfalls of the dual uses any mature technology might be put to, whether that technology is as dramatic as nuclear power/weapons or as mundane as a free/premium software license. But every metaphor has its limits. Pushed too far, metaphors break down, and instead of illuminating, they obscure. Which brings me to ask: how far can the hacking metaphor be pushed within DIYbio—at least the part of DIYbio falling in line with synthetic biology?
Mature Engineering, Control Theory, Open Access USA, and UK Health Data Too-Open?
- On Being a Senior Engineer (Etsy) — Mature engineers know that no matter how complete, elegant, or superior their designs are, it won’t matter if no one wants to work alongside them because they are assholes.
- Control Theory (Coursera) — Learn about how to make mobile robots move in effective, safe, predictable, and collaborative ways using modern control theory. (via DIY Drones)
- US Moves Towards Open Access (WaPo) — Congress passed a budget that will make about half of taxpayer-funded research available to the public.
- NHS Patient Data Available for Companies to Buy (The Guardian) — Once live, organisations such as university research departments – but also insurers and drug companies – will be able to apply to the new Health and Social Care Information Centre (HSCIC) to gain access to the database, called care.data. If an application is approved then firms will have to pay to extract this information, which will be scrubbed of some personal identifiers but not enough to make the information completely anonymous – a process known as “pseudonymisation”. Recipe for disaster as it has been repeatedly shown that it’s easy to identify individuals, given enough scrubbed data. Can’t see why the NHS just doesn’t make it an app in Facebook. “Nat’s Prostate status: it’s complicated.”
AI Book, Science Superstars, Engineering Ethics, and Crowdsourced Science
- Society of Mind — Marvin Minsky’s book now Creative-Commons licensed.
- Collaboration, Stars, and the Changing Organization of Science: Evidence from Evolutionary Biology — The concentration of research output is declining at the department level but increasing at the individual level. […] We speculate that this may be due to changing patterns of collaboration, perhaps caused by the rising burden of knowledge and the falling cost of communication, both of which increase the returns to collaboration. Indeed, we report evidence that the propensity to collaborate is rising over time. (via Sciblogs)
- As Engineers, We Must Consider the Ethical Implications of our Work (The Guardian) — applies to coders and designers as well.
- Eyewire — a game to crowdsource the mapping of 3D structure of neurons.